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Disc1
| 1 | Main Title | James Horner | 3:08 |
| 2 | Surprise Attack | James Horner | 5:08 |
| 3 | Spock | James Horner | 1:13 |
| 4 | Kirk's Explosive Reply | James Horner | 4:02 |
| 5 | Khan's Pets | James Horner | 4:19 |
| 6 | Enterprise Clears Moorings | James Horner | 3:36 |
| 7 | Battle in the Mutara Nebula | James Horner | 8:05 |
| 8 | Genesis Countdown | James Horner | 6:36 |
| 9 | Epilogue / End Title | James Horner | 8:43 |